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C42C1.8 MFS domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 178179, updated on 2-Nov-2024

Summary

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Official Symbol
C42C1.8
Official Full Name
MFS domain-containing protein
Primary source
WormBase:WBGene00016586
Locus tag
CELE_C42C1.8
See related
AllianceGenome:WB:WBGene00016586
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be active in membrane. Orthologous to human SLC49A3 (solute carrier family 49 member 3). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C42C1.8 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
4
Sequence:
Chromosome: IV; NC_003282.8 (12291046..12293287)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Erlin Neighboring gene Protein kinase domain-containing protein Neighboring gene Acyl_transf_3 domain-containing protein Neighboring gene ncRNA Neighboring gene Acyl_transf_3 domain-containing protein Neighboring gene ncRNA Neighboring gene Acyl_transf_3 domain-containing protein;Acyltransferase 3 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
MFS domain-containing protein
NP_502341.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    12291046..12293287
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069940.7 → NP_502341.1  MFS domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502341.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A3QMB7
    Conserved Domains (2) summary
    cd06174
    Location:88 → 499
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam07690
    Location:91 → 439
    MFS_1; Major Facilitator Superfamily
Nucleotide Protein
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