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C08F11.12 UPF0375 protein C08F11.12 [ Caenorhabditis elegans ]

Gene ID: 178333, updated on 2-Nov-2024

Summary

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Official Symbol
C08F11.12
Official Full Name
UPF0375 protein C08F11.12
Primary source
WormBase:WBGene00007459
Locus tag
CELE_C08F11.12
See related
AllianceGenome:WB:WBGene00007459
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C08F11.12 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (13651014..13651511, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene DUF19 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene pseudo Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Galectin LEC-1 plays a defensive role against damage due to oxidative stress in Caenorhabditis elegans. Takeuchi T, et al. J Biochem, 2013 Nov. PMID 23935187
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
UPF0375 protein C08F11.12
NP_502637.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    13651014..13651511 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_070236.6 → NP_502637.1  UPF0375 protein C08F11.12 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502637.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9U3R0
    Conserved Domains (1) summary
    pfam07403
    Location:1 → 114
    DUF1505; Protein of unknown function (DUF1505)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9U3R0.1

Gene LinkOut

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