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eef-1B.2 putative elongation factor 1-beta/1-delta 2 [ Caenorhabditis elegans ]

Gene ID: 178419, updated on 2-Nov-2024

Summary

Official Symbol
eef-1B.2
Official Full Name
putative elongation factor 1-beta/1-delta 2
Primary source
WormBase:WBGene00012768
Locus tag
CELE_Y41E3.10
See related
AllianceGenome:WB:WBGene00012768
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in translational elongation. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation elongation factor 1 complex. Predicted to be active in cytosol. Orthologous to several human genes including EEF1B2 (eukaryotic translation elongation factor 1 beta 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See eef-1B.2 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
4
Sequence:
Chromosome: IV; NC_003282.8 (15037331..15039551)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene FANCD2 Neighboring gene Glycine Rich Secreted Protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene B30.2/SPRY domain-containing protein Neighboring gene Serpentine Receptor, class T Neighboring gene ncRNA

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables rRNA (uridine-N3-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in rRNA base methylation IEA
Inferred from Electronic Annotation
more info
 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
involved_in translational elongation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of eukaryotic translation elongation factor 1 complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
putative elongation factor 1-beta/1-delta 2
NP_001122811.1
  • Confirmed by transcript evidence
NP_502816.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    15037331..15039551
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001129339.2NP_001122811.1  putative elongation factor 1-beta/1-delta 2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001122811.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9U2H9
    Conserved Domains (2) summary
    pfam10354
    Location:122294
    DUF2431; Domain of unknown function (DUF2431)
    cl00518
    Location:388439
    Asp_Glu_race; Asp/Glu/Hydantoin racemase
  2. NM_070415.6NP_502816.2  putative elongation factor 1-beta/1-delta 2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502816.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A3RMU4, H9G359, H9G360, Q9U2H9
    Conserved Domains (1) summary
    pfam00736
    Location:179263
    EF1_GNE; EF-1 guanine nucleotide exchange domain