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Y105C5B.15 Purple acid phosphatase [ Caenorhabditis elegans ]

Gene ID: 178448, updated on 2-Nov-2024

Summary

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Official Symbol
Y105C5B.15
Official Full Name
Purple acid phosphatase
Primary source
WormBase:WBGene00013654
Locus tag
CELE_Y105C5B.15
See related
AllianceGenome:WB:WBGene00013654
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable acid phosphatase activity and metal ion binding activity. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y105C5B.15 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
5
Sequence:
Chromosome: IV; NC_003282.8 (15951936..15954836)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables acid phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Purple acid phosphatase
NP_001294121.1
  • Confirmed by transcript evidence
NP_502904.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    15951936..15954836
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_070503.9 → NP_502904.1  Purple acid phosphatase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502904.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U309
    Conserved Domains (3) summary
    cd00839
    Location:120 → 416
    MPP_PAPs; purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain
    pfam00149
    Location:124 → 324
    Metallophos; Calcineurin-like phosphoesterase
    pfam16656
    Location:23 → 116
    Pur_ac_phosph_N; Purple acid Phosphatase, N-terminal domain

  2. NM_001307192.3 → NP_001294121.1  Purple acid phosphatase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001294121.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A078BQP7
    Conserved Domains (3) summary
    cd00839
    Location:67 → 363
    MPP_PAPs; purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain
    pfam00149
    Location:71 → 271
    Metallophos; Calcineurin-like phosphoesterase
    pfam16656
    Location:2 → 63
    Pur_ac_phosph_N; Purple acid Phosphatase, N-terminal domain
Nucleotide Protein
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