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pei-2 BTB domain-containing protein;SAM domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 178603, updated on 18-Sep-2024

Summary

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Official Symbol
pei-2
Official Full Name
BTB domain-containing protein;SAM domain-containing protein
Primary source
WormBase:WBGene00019972
Locus tag
CELE_R09A1.2
See related
AllianceGenome:WB:WBGene00019972
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See pei-2 in Genome Data Viewer
Location:
chromosome: V
Exon count:
9
Sequence:
Chromosome: V; NC_003283.11 (1018336..1023467, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene VASP tetramerization domain-containing protein;VASP_tetra domain-containing protein;WH1 domain-containing protein Neighboring gene Drf_GBD domain-containing protein Neighboring gene Piwi domain-containing protein;Piwi-like protein ergo-1 Neighboring gene UPF0496 protein Neighboring gene FMRF-Like Peptide

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Membrane-associated cytoplasmic granules carrying the Argonaute protein WAGO-3 enable paternal epigenetic inheritance in Caenorhabditis elegans. Schreier J, et al. Nat Cell Biol, 2022 Feb. PMID 35132225, Free PMC Article
  2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
BTB domain-containing protein;SAM domain-containing protein
NP_001300167.1
  • Confirmed by transcript evidence
NP_001300168.1
  • Confirmed by transcript evidence
NP_001300169.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    1018336..1023467 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001313238.2 → NP_001300167.1  BTB domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AS98
    Conserved Domains (1) summary
    cd18186
    Location:48 → 126
    BTB_POZ_ZBTB_KLHL-like; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing (ZBTB) proteins, Kelch-like (KLHL) proteins, and similar proteins

  2. NM_001313239.3 → NP_001300168.1  BTB domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AVT4

  3. NM_001313240.3 → NP_001300169.1  SAM domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AY27

RNA

  1. NR_132494.1 RNA Sequence

    Status: REVIEWED

  2. NR_132495.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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