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C39F7.5 BACK domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 178621, updated on 2-Nov-2024

Summary

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Official Symbol
C39F7.5
Official Full Name
BACK domain-containing protein
Primary source
WormBase:WBGene00016540
Locus tag
CELE_C39F7.5
See related
AllianceGenome:WB:WBGene00016540
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in morphogenesis of a branching epithelium. Orthologous to human BTBD7 (BTB domain containing 7). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C39F7.5 in Genome Data Viewer
Location:
chromosome: V
Exon count:
7
Sequence:
Chromosome: V; NC_003283.11 (1264773..1270107)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene RAB family Neighboring gene ncRNA Neighboring gene DNA-directed RNA polymerase III subunit RPC4 Neighboring gene ANK_REP_REGION domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in morphogenesis of a branching epithelium IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
BACK domain-containing protein
NP_503398.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    1264773..1270107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_070997.7 → NP_503398.1  BACK domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503398.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9UAQ7
    Conserved Domains (2) summary
    cd18284
    Location:212 → 353
    BTB2_POZ_BTBD7; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 7 (BTBD7)
    cd18489
    Location:358 → 454
    BACK_BTBD7; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 7 (BTBD7)
Nucleotide Protein
Heading Accession and Version

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