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cnc-3 CaeNaCin (Caenorhabditis bacteriocin) [ Caenorhabditis elegans ]

Gene ID: 178636, updated on 18-Sep-2024

Summary

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Official Symbol
cnc-3
Official Full Name
CaeNaCin (Caenorhabditis bacteriocin)
Primary source
WormBase:WBGene00000557
Locus tag
CELE_R09B5.8
See related
AllianceGenome:WB:WBGene00000557
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See cnc-3 in Genome Data Viewer
Location:
chromosome: V
Exon count:
2
Sequence:
Chromosome: V; NC_003283.11 (1448004..1448792)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene CaeNaCin (Caenorhabditis bacteriocin) Neighboring gene CaeNaCin (Caenorhabditis bacteriocin) Neighboring gene CaeNaCin (Caenorhabditis bacteriocin) Neighboring gene Serpentine Receptor, class J;Serpentine receptor class gamma

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Neuroimmune regulation of antimicrobial peptide expression by a noncanonical TGF-beta signaling pathway in Caenorhabditis elegans epidermis. Zugasti O, et al. Nat Immunol, 2009 Mar. PMID 19198592
  2. TLR-independent control of innate immunity in Caenorhabditis elegans by the TIR domain adaptor protein TIR-1, an ortholog of human SARM. Couillault C, et al. Nat Immunol, 2004 May. PMID 15048112
  3. Innate Immunity Promotes Sleep through Epidermal Antimicrobial Peptides. Sinner MP, et al. Curr Biol, 2021 Feb 8. PMID 33259791
  4. Evolution of the innate immune system: the worm perspective. Schulenburg H, et al. Immunol Rev, 2004 Apr. PMID 15199953
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

General protein information

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Preferred Names
CaeNaCin (Caenorhabditis bacteriocin)
NP_503417.1
  • Product from WormBase gene class cnc;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    1448004..1448792
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071016.5 → NP_503417.1  CaeNaCin (Caenorhabditis bacteriocin) [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503417.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O44612
Nucleotide Protein
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