ldp-1 Lipid droplet localized protein [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: ldp-1
Official Full Name: Lipid droplet localized protein
Primary source: WormBase:WBGene00017719
Locus tag: CELE_F22F7.1
See related: AllianceGenome:WB:WBGene00017719
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to be involved in glycolipid biosynthetic process. Predicted to be located in membrane. Predicted to be active in lipid droplet. Is expressed in several structures, including body wall musculature; intestine; nervous system; pharynx; and tail. Orthologous to human SCCPDH (saccharopine dehydrogenase (putative)). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ldp-1 in Genome Data Viewer

Location:: chromosome: V

Exon count:: 5

Sequence:: Chromosome: V; NC_003283.11 (2127535..2130100)

Chromosome V - NC_003283.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

F22F7.1 (e-PCR)
- UniSTS:313093

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Process	Evidence Code	Pubs
involved_in glycolipid biosynthetic process	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in lipid droplet	IBA Inferred from Biological aspect of Ancestor more info
located_in lipid droplet	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: Lipid droplet localized protein

NP_001379806.1

Confirmed by transcript evidence

NP_872194.2

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003283.11 Reference assembly

Range

2127535..2130100

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001392486.1 → NP_001379806.1 Lipid droplet localized protein [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/Swiss-Prot

Q8IA58, Q9GZE9

Conserved Domains (1) summary

COG3268
Location:4 → 421

COG3268; Uncharacterized conserved protein, related to short-chain dehydrogenases [Function unknown]
NM_182394.7 → NP_872194.2 Lipid droplet localized protein [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9GZE9

Conserved Domains (1) summary

COG3268
Location:1 → 299

COG3268; Uncharacterized conserved protein, related to short-chain dehydrogenases [Function unknown]