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pud-4 Up-regulated in Daf-2 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 178712, updated on 2-Nov-2024

Summary

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Official Symbol
pud-4
Official Full Name
Up-regulated in Daf-2 domain-containing protein
Primary source
WormBase:WBGene00017498
Locus tag
CELE_F15E11.12
See related
AllianceGenome:WB:WBGene00017498
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in hyp7 syncytium. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See pud-4 in Genome Data Viewer
Location:
chromosome: V
Exon count:
2
Sequence:
Chromosome: V; NC_003283.11 (2326678..2327282)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Up-regulated in Daf-2 domain-containing protein Neighboring gene Up-regulated in Daf-2 domain-containing protein Neighboring gene Up-regulated in Daf-2 domain-containing protein Neighboring gene Up-regulated in Daf-2 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of PUD-1 and PUD-2, two proteins up-regulated in a long-lived daf-2 mutant. Ding YH, et al. PLoS One, 2013. PMID 23799143, Free PMC Article
  2. Transcriptome profiling of the C. elegans Rb ortholog reveals diverse developmental roles. Kirienko NV, et al. Dev Biol, 2007 May 15. PMID 17368442, Free PMC Article
  3. Transcriptional repressor and activator activities of SMA-9 contribute differentially to BMP-related signaling outputs. Liang J, et al. Dev Biol, 2007 May 15. PMID 17397820
  4. Ca(2+)/Calmodulin-binding proteins from the C. elegans proteome. Shen X, et al. Cell Calcium, 2008 May. PMID 17854888
  5. Transcriptomics of ivermectin response in Caenorhabditis elegans: Integrating abamectin quantitative trait loci and comparison to the Ivermectin-exposed DA1316 strain. Dube F, et al. PLoS One, 2023. PMID 37141255, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Up-regulated in Daf-2 domain-containing protein
NP_001294745.1
  • Confirmed by transcript evidence
NP_001294746.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    2326678..2327282
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001307816.3 → NP_001294745.1  Up-regulated in Daf-2 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001294745.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M1ZJ62
    Conserved Domains (1) summary
    pfam18457
    Location:12 → 152
    PUD1_2; Up-Regulated in long-lived daf-2

  2. NM_001307817.4 → NP_001294746.1  Up-regulated in Daf-2 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001294746.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M1ZMJ3
    Conserved Domains (1) summary
    pfam18457
    Location:12 → 138
    PUD1_2; Up-Regulated in long-lived daf-2
Nucleotide Protein
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