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Y61A9LA.10 Bms1-type G domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 178851, updated on 2-Nov-2024

Summary

Official Symbol
Y61A9LA.10
Official Full Name
Bms1-type G domain-containing protein
Primary source
WormBase:WBGene00022021
Locus tag
CELE_Y61A9LA.10
See related
AllianceGenome:WB:WBGene00022021
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable GTP binding activity; GTPase activity; and U3 snoRNA binding activity. Predicted to be involved in endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to be located in nucleolus. Is expressed in head; nervous system; and pharynx. Human ortholog(s) of this gene implicated in nonsyndromic aplasia cutis congenita. Orthologous to human BMS1 (BMS1 ribosome biogenesis factor). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See Y61A9LA.10 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (4607039..4615817, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Major facilitator superfamily (MFS) profile domain-containing protein Neighboring gene ncRNA Neighboring gene transcellular chaperone signaling (x)cross tissue Neighboring gene DEK_C domain-containing protein Neighboring gene Protein sumv-2

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables GTP binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables U3 snoRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Bms1-type G domain-containing protein
NP_504245.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    4607039..4615817 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071844.6NP_504245.3  Bms1-type G domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504245.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9N306
    Conserved Domains (1) summary
    COG5192
    Location:101045
    BMS1; GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis]