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C37H5.13 Acetyltransferase;Acyl-coenzyme A thioesterase 8;RRM_2 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 178878, updated on 2-Nov-2024

Summary

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Official Symbol
C37H5.13
Official Full Name
Acetyltransferase;Acyl-coenzyme A thioesterase 8;RRM_2 domain-containing protein
Primary source
WormBase:WBGene00016511
Locus tag
CELE_C37H5.13
See related
AllianceGenome:WB:WBGene00016511
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable fatty acyl-CoA hydrolase activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid catabolic process. Predicted to be active in peroxisomal matrix. Orthologous to human ACOT8 (acyl-CoA thioesterase 8). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C37H5.13 in Genome Data Viewer
Location:
chromosome: V
Exon count:
8
Sequence:
Chromosome: V; NC_003283.11 (4856958..4862965, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Abhydrolase domain-containing protein abhd-5.2 Neighboring gene Abhydrolase domain-containing protein abhd-5.1 Neighboring gene Annexin Neighboring gene Serpentine receptor class delta-32 Neighboring gene Serpentine receptor class delta-33 Neighboring gene Gamma-glutamyltranspeptidase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables fatty acyl-CoA hydrolase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables fatty acyl-CoA hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in acyl-CoA metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in fatty acid catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in peroxisomal matrix IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Acetyltransferase;Acyl-coenzyme A thioesterase 8;RRM_2 domain-containing protein
NP_001367644.1
  • Confirmed by transcript evidence
NP_001379791.1
  • Partially confirmed by transcript evidence
NP_504301.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    4856958..4862965 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071900.6 → NP_504301.1  Acyl-coenzyme A thioesterase 8 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504301.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95Q68
    Conserved Domains (3) summary
    cd03444
    Location:297 → 401
    Thioesterase_II_repeat1; Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) ...
    cd03445
    Location:113 → 206
    Thioesterase_II_repeat2; Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) ...
    TIGR00189
    Location:108 → 402
    tesB; acyl-CoA thioesterase II

  2. NM_001392507.1 → NP_001379791.1  Acetyltransferase [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZ87

  3. NM_001380640.1 → NP_001367644.1  RRM_2 domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A3RMS7
Nucleotide Protein
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