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odr-2 Homolog of Odr-2 (Two);Protein quiver;Protein sleepless [ Caenorhabditis elegans ]

Gene ID: 179098, updated on 2-Nov-2024

Summary

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Official Symbol
odr-2
Official Full Name
Homolog of Odr-2 (Two);Protein quiver;Protein sleepless
Primary source
WormBase:WBGene00003849
Locus tag
CELE_T01C4.2
See related
AllianceGenome:WB:WBGene00003849
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in olfactory behavior and response to odorant. Located in axon; external side of plasma membrane; and neuronal cell body. Is expressed in several structures, including IL1 neuron; ganglia; head neurons; somatic nervous system; and tail. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See odr-2 in Genome Data Viewer
Location:
chromosome: V
Exon count:
8
Sequence:
Chromosome: V; NC_003283.11 (7103547..7114439)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Early Pheromone Experience Modifies a Synaptic Activity to Influence Adult Pheromone Responses of C. elegans. Hong M, et al. Curr Biol, 2017 Oct 23. PMID 28988862, Free PMC Article
  2. Active uptake of artificial particles in the nematode Caenorhabditis elegans. Kiyama Y, et al. J Exp Biol, 2012 Apr 1. PMID 22399663
  3. Five-colour in vivo imaging of neurons in Caenorhabditis elegans. Hutter H. J Microsc, 2004 Aug. PMID 15315508
  4. Visualization of integral and peripheral cell surface proteins in live Caenorhabditis elegans. Gottschalk A, et al. J Neurosci Methods, 2006 Jun 30. PMID 16466809
  5. The mind of a worm. Thomas JH. Science, 1994 Jun 17. PMID 7911601

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in chemosensory behavior IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in olfactory behavior IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in olfactory behavior IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in response to odorant IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in response to odorant IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in sensory perception of smell NAS
Non-traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
is_active_in axon IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in axon IDA
Inferred from Direct Assay
more info
 PubMed 
located_in external side of plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in neuron projection IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in neuronal cell body IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in neuronal cell body IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Homolog of Odr-2 (Two);Protein quiver;Protein sleepless
NP_001024089.1
  • Confirmed by transcript evidence
NP_001024090.1
  • Confirmed by transcript evidence
NP_001380092.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    7103547..7114439
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001392541.1 → NP_001380092.1  Homolog of Odr-2 (Two) [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q94294, Q9BMI0
    Conserved Domains (1) summary
    pfam06579
    Location:58 → 180
    Ly-6_related; Caenorhabditis elegans ly-6-related protein

  2. NM_001028919.5 → NP_001024090.1  Protein quiver [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001024090.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9BMH9
    Conserved Domains (1) summary
    pfam06579
    Location:34 → 155
    Ly-6_related; Caenorhabditis elegans ly-6-related protein

  3. NM_001028918.4 → NP_001024089.1  Protein sleepless [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001024089.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EEC7
    Conserved Domains (1) summary
    pfam06579
    Location:30 → 151
    Ly-6_related; Caenorhabditis elegans ly-6-related protein
Nucleotide Protein
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