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ets-6 ETS class transcription factor [ Caenorhabditis elegans ]

Gene ID: 179141, updated on 2-Nov-2024

Summary

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Official Symbol
ets-6
Official Full Name
ETS class transcription factor
Primary source
WormBase:WBGene00017606
Locus tag
CELE_F19F10.10
See related
AllianceGenome:WB:WBGene00017606
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in negative regulation of vulval development. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ets-6 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (7577512..7580546, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene DUF2769 domain-containing protein Neighboring gene uncharacterized protein Neighboring gene Beta-Casp domain-containing protein Neighboring gene HAT C-terminal dimerization domain-containing protein Neighboring gene SpoU_methylase domain-containing protein Neighboring gene Ig-like domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A global analysis of genetic interactions in Caenorhabditis elegans. Byrne AB, et al. J Biol, 2007. PMID 17897480, Free PMC Article
  2. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in negative regulation of vulval development IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ETS class transcription factor
NP_504954.1
  • Product from WormBase gene class ets;
    Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    7577512..7580546 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_072553.6 → NP_504954.1  ETS class transcription factor [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504954.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O01525
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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