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grl-10 Ground-like domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 179152, updated on 18-Sep-2024

Summary

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Official Symbol
grl-10
Official Full Name
Ground-like domain-containing protein
Primary source
WormBase:WBGene00001719
Locus tag
CELE_C26F1.5
See related
AllianceGenome:WB:WBGene00001719
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in amphid socket cell; hypodermis; tail; and vulval cell. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See grl-10 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (7774545..7775759)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Adenosine 5'-monophosphoramidase HINT3 Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene Large ribosomal subunit protein eL39 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ubiquitin-like domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Changes in Caenorhabditis elegans gene expression following exposure to Photorhabdus luminescens strain TT01. Hoinville ME, et al. Dev Comp Immunol, 2018 May. PMID 29203330
  2. Caenorhabditis elegans has scores of hedgehog-related genes: sequence and expression analysis. Aspöck G, et al. Genome Res, 1999 Oct. PMID 10523520
  3. Comprehensive analysis of gene expression patterns of hedgehog-related genes. Hao L, et al. BMC Genomics, 2006 Oct 31. PMID 17076889, Free PMC Article
  4. Evolution of hedgehog and hedgehog-related genes, their origin from Hog proteins in ancestral eukaryotes and discovery of a novel Hint motif. Bürglin TR. BMC Genomics, 2008 Mar 11. PMID 18334026, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
Ground-like domain-containing protein
NP_505005.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    7774545..7775759
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_072604.8 → NP_505005.1  Ground-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_505005.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q18230
    Conserved Domains (1) summary
    pfam04155
    Location:203 → 272
    Ground-like; Ground-like domain
Nucleotide Protein
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