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uvs-1 UV-stimulated scaffold protein A homolog [ Caenorhabditis elegans ]

Gene ID: 179158, updated on 2-Nov-2024

Summary

Official Symbol
uvs-1
Official Full Name
UV-stimulated scaffold protein A homolog
Primary source
WormBase:WBGene00022812
Locus tag
CELE_ZK742.2
See related
AllianceGenome:WB:WBGene00022812
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable RNA polymerase II complex binding activity. Involved in response to UV and transcription-coupled nucleotide-excision repair. Predicted to be active in chromosome. Human ortholog(s) of this gene implicated in UV-sensitive syndrome. Orthologous to human UVSSA (UV stimulated scaffold protein A). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See uvs-1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
8
Sequence:
Chromosome: V; NC_003283.11 (7801505..7804208, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene GLGPRPLRF-amide Neighboring gene Neuropeptide-Like Protein Neighboring gene ncRNA Neighboring gene Exportin-1 C-terminal domain-containing protein;Importin N-terminal domain-containing protein Neighboring gene NADH:flavin oxidoreductase/NADH oxidase N-terminal domain-containing protein

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables RNA polymerase II complex binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 
involved_in response to UV IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in response to UV IEA
Inferred from Electronic Annotation
more info
 
involved_in response to UV IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in transcription-coupled nucleotide-excision repair IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in transcription-coupled nucleotide-excision repair IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in chromosome IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
UV-stimulated scaffold protein A homolog
NP_505012.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    7801505..7804208 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_072611.6NP_505012.2  UV-stimulated scaffold protein A homolog [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q23088
    Conserved Domains (1) summary
    pfam09740
    Location:389491
    DUF2043; Uncharacterized conserved protein (DUF2043)