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myo-5 MYOsin heavy chain structural genes [ Caenorhabditis elegans ]

Gene ID: 179190, updated on 2-Nov-2024

Summary

Official Symbol
myo-5
Official Full Name
MYOsin heavy chain structural genes
Primary source
WormBase:WBGene00019064
Locus tag
CELE_F58G4.1
See related
AllianceGenome:WB:WBGene00019064
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable actin filament binding activity and microfilament motor activity. Predicted to be involved in muscle contraction and sarcomere organization. Predicted to be located in sarcomere. Predicted to be part of myosin II complex. Predicted to be active in cytoplasm and myosin filament. Is expressed in pharynx. Human ortholog(s) of this gene implicated in several diseases, including cardiomyopathy (multiple); congenital heart disease (multiple); contractures, pterygia, and spondylocarpotarsal fusion syndrome (multiple); heart conduction disease (multiple); and muscle tissue disease (multiple). Orthologous to several human genes including MYH1 (myosin heavy chain 1); MYH13 (myosin heavy chain 13); and MYH15 (myosin heavy chain 15). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See myo-5 in Genome Data Viewer
Location:
chromosome: V
Exon count:
14
Sequence:
Chromosome: V; NC_003283.11 (8108970..8118131)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Seven TM Receptor Neighboring gene SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein Neighboring gene ncRNA Neighboring gene Glycosyltransferase family 92 protein Neighboring gene Glycosyltransferase family 92 protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables actin binding IEA
Inferred from Electronic Annotation
more info
 
enables actin filament binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 
enables cytoskeletal motor activity IEA
Inferred from Electronic Annotation
more info
 
enables microfilament motor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 
involved_in anatomical structure formation involved in morphogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular component assembly IEA
Inferred from Electronic Annotation
more info
 
involved_in muscle contraction IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in sarcomere organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in supramolecular fiber organization IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in myofibril IEA
Inferred from Electronic Annotation
more info
 
part_of myosin II complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 
is_active_in myosin filament IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in myosin filament IEA
Inferred from Electronic Annotation
more info
 
located_in sarcomere IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
MYOsin heavy chain structural genes
NP_505094.1
  • Product from WormBase gene class myo;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    8108970..8118131
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_072693.4NP_505094.1  MYOsin heavy chain structural genes [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_505094.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q21000
    Conserved Domains (8) summary
    cd01377
    Location:95776
    MYSc_class_II; class II myosins, motor domain
    pfam00063
    Location:83776
    Myosin_head; Myosin head (motor domain)
    pfam01576
    Location:8531933
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:3168
    Myosin_N; Myosin N-terminal SH3-like domain
    pfam10267
    Location:12121322
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein
    pfam16043
    Location:9541129
    DUF4795; Domain of unknown function (DUF4795)
    cl09111
    Location:11111243
    Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
    cl19849
    Location:17461838
    DUF881; Bacterial protein of unknown function (DUF881)