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nhr-44 Nuclear hormone receptor family member nhr-44 [ Caenorhabditis elegans ]

Gene ID: 179276, updated on 2-Nov-2024

Summary

Official Symbol
nhr-44
Official Full Name
Nuclear hormone receptor family member nhr-44
Primary source
WormBase:WBGene00003634
Locus tag
CELE_T19A5.4
See related
AllianceGenome:WB:WBGene00003634
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is expressed in head muscle; intestine; neurons; and pharynx. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See nhr-44 in Genome Data Viewer
Location:
chromosome: V
Exon count:
10
Sequence:
Chromosome: V; NC_003283.11 (8961878..8964105, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Germinal center kinase 1;non-specific serine/threonine protein kinase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene TPR_REGION domain-containing protein Neighboring gene Nuclear Hormone Receptor family Neighboring gene pseudo

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Nuclear hormone receptor family member nhr-44
NP_505313.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    8961878..8964105 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_072912.8NP_505313.1  Nuclear hormone receptor family member nhr-44 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_505313.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q22555, Q9GTH3
    UniProtKB/TrEMBL
    Q5VKT9
    Conserved Domains (2) summary
    smart00399
    Location:2394
    ZnF_C4; c4 zinc finger in nuclear hormone receptors
    pfam00104
    Location:198403
    Hormone_recep; Ligand-binding domain of nuclear hormone receptor