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K09G1.1 MARVEL domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 179346, updated on 2-Nov-2024

Summary

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Official Symbol
K09G1.1
Official Full Name
MARVEL domain-containing protein
Primary source
WormBase:WBGene00010727
Locus tag
CELE_K09G1.1
See related
AllianceGenome:WB:WBGene00010727
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See K09G1.1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
9
Sequence:
Chromosome: V; NC_003283.11 (9583627..9590517)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Serine/threonine-protein phosphatase Neighboring gene Uncharacterized protein Neighboring gene CTCK domain-containing protein Neighboring gene RNA polymerase-associated protein RTF1 homolog Neighboring gene Protein RER1 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
  2. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
  3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
MARVEL domain-containing protein
NP_001256124.1
  • Confirmed by transcript evidence
NP_001256125.1
  • Partially confirmed by transcript evidence
NP_001367179.1
  • Confirmed by transcript evidence
NP_001379195.1
  • Confirmed by transcript evidence
NP_001379281.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    9583627..9590517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001269195.3 → NP_001256124.1  MARVEL domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256124.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D9N146
    Conserved Domains (1) summary
    pfam01284
    Location:90 → 218
    MARVEL; Membrane-associating domain

  2. NM_001380730.1 → NP_001367179.1  MARVEL domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A9UJP1
    Conserved Domains (1) summary
    pfam01284
    Location:87 → 215
    MARVEL; Membrane-associating domain

  3. NM_001269196.3 → NP_001256125.1  MARVEL domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256125.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D9N147
    Conserved Domains (1) summary
    pfam01284
    Location:96 → 224
    MARVEL; Membrane-associating domain

  4. NM_001392579.1 → NP_001379281.1  MARVEL domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95ZR6
    Conserved Domains (1) summary
    pfam01284
    Location:49 → 177
    MARVEL; Membrane-associating domain

  5. NM_001392580.1 → NP_001379195.1  MARVEL domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XVL1
    Conserved Domains (1) summary
    pfam01284
    Location:61 → 189
    MARVEL; Membrane-associating domain
Nucleotide Protein
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