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C27H6.8 MYG1 protein C27H6.8 [ Caenorhabditis elegans ]

Gene ID: 179392, updated on 2-Nov-2024

Summary

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Official Symbol
C27H6.8
Official Full Name
MYG1 protein C27H6.8
Primary source
WormBase:WBGene00007787
Locus tag
CELE_C27H6.8
See related
AllianceGenome:WB:WBGene00007787
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in cytoplasm and nucleus. Orthologous to human MYG1 (MYG1 exonuclease). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C27H6.8 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (9986431..9987788, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Schlafen-like protein 1 Neighboring gene Mitochondrial genome maintenance exonuclease 1 Neighboring gene TPR_REGION domain-containing protein Neighboring gene Piwi domain-containing protein Neighboring gene Trafficking protein particle complex subunit 6B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
  2. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
  3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
MYG1 protein C27H6.8
NP_741610.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    9986431..9987788 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_171524.5 → NP_741610.1  MYG1 protein C27H6.8 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_741610.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O17606
    Conserved Domains (1) summary
    pfam03690
    Location:5 → 325
    UPF0160; uncharacterized protein family (UPF0160)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O17606.2

Gene LinkOut

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