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Y32F6A.5 Retinoid-inducible serine carboxypeptidase [ Caenorhabditis elegans ]

Gene ID: 179459, updated on 2-Nov-2024

Summary

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Official Symbol
Y32F6A.5
Official Full Name
Retinoid-inducible serine carboxypeptidase
Primary source
WormBase:WBGene00012530
Locus tag
CELE_Y32F6A.5
See related
AllianceGenome:WB:WBGene00012530
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable serine-type carboxypeptidase activity. Predicted to be involved in proteolysis. Orthologous to human SCPEP1 (serine carboxypeptidase 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y32F6A.5 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (10446534..10453605, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene SET domain-containing protein Neighboring gene Transporter Neighboring gene Poly(A) polymerase Neighboring gene pseudo Neighboring gene BPTI/Kunitz inhibitor domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
  2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables serine-type carboxypeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables serine-type carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Retinoid-inducible serine carboxypeptidase
NP_001256221.1
  • Partially confirmed by transcript evidence
NP_001367028.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    10446534..10453605 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001269292.1 → NP_001256221.1  Retinoid-inducible serine carboxypeptidase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256221.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EDP0
    Conserved Domains (1) summary
    cl08270
    Location:34 → 442
    Peptidase_S10; Serine carboxypeptidase

  2. NM_001380746.2 → NP_001367028.1  Retinoid-inducible serine carboxypeptidase [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EDP0
    Conserved Domains (1) summary
    cl08270
    Location:34 → 442
    Peptidase_S10; Serine carboxypeptidase
Nucleotide Protein
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