U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

scb-1 MRG domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 179539, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
scb-1
Official Full Name
MRG domain-containing protein
Primary source
WormBase:WBGene00010407
Locus tag
CELE_H19N07.3
See related
AllianceGenome:WB:WBGene00010407
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Located in nucleus. Is expressed in somatic cell. [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See scb-1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (11118766..11119705, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene LYR motif-containing protein 5 Neighboring gene pseudo Neighboring gene Eukaryotic peptide chain release factor GTP-binding subunit;Translation elongation factor EFTu/EF1A C-terminal domain-containing protein Neighboring gene Ubiquitin carboxyl-terminal hydrolase 7 Neighboring gene O-acyltransferase;diacylglycerol O-acyltransferase Neighboring gene ATP synthase subunit d, mitochondrial

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The Gene scb-1 Underlies Variation in Caenorhabditis elegans Chemotherapeutic Responses. Evans KS, et al. G3 (Bethesda), 2020 Jul 7. PMID 32385045, Free PMC Article
  2. A Novel Gene Underlies Bleomycin-Response Variation in Caenorhabditis elegans. Brady SC, et al. Genetics, 2019 Aug. PMID 31171655, Free PMC Article
  3. Sleep-active neuron specification and sleep induction require FLP-11 neuropeptides to systemically induce sleep. Turek M, et al. Elife, 2016 Mar 7. PMID 26949257, Free PMC Article
  4. NHJ-1 Is Required for Canonical Nonhomologous End Joining in Caenorhabditis elegans. Vujin A, et al. Genetics, 2020 Jul. PMID 32457132, Free PMC Article
  5. Natural variation in the sequestosome-related gene, sqst-5, underlies zinc homeostasis in Caenorhabditis elegans. Evans KS, et al. PLoS Genet, 2020 Nov. PMID 33175833, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The Gene scb-1 Underlies Variation in Caenorhabditis elegans Chemotherapeutic Responses.
    Title: The Gene scb-1 Underlies Variation in Caenorhabditis elegans Chemotherapeutic Responses.
  2. Scb-1 is required for bleomycin resistance.
    Title: A Novel Gene Underlies Bleomycin-Response Variation in Caenorhabditis elegans.
Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
MRG domain-containing protein
NP_001256300.1
  • Confirmed by transcript evidence
NP_001379237.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    11118766..11119705 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001392610.1 → NP_001379237.1  MRG domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    O45625

  2. NM_001269371.3 → NP_001256300.1  MRG domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256300.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E9P8A3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools