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tmed-10 Transmembrane emp24 domain-containing protein bai [ Caenorhabditis elegans ]

Gene ID: 179567, updated on 2-Nov-2024

Summary

Official Symbol
tmed-10
Official Full Name
Transmembrane emp24 domain-containing protein bai
Primary source
WormBase:WBGene00009829
Locus tag
CELE_F47G9.1
See related
AllianceGenome:WB:WBGene00009829
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in Golgi organization; endoplasmic reticulum to Golgi vesicle-mediated transport; and intracellular protein transport. Predicted to be located in membrane. Predicted to be active in several cellular components, including COPII-coated ER to Golgi transport vesicle; Golgi apparatus; and endoplasmic reticulum-Golgi intermediate compartment. Is expressed in several structures, including enteric muscle; hermaphrodite distal tip cell; nervous system; seam cell; and vulval muscle. Orthologous to human TMED10 (transmembrane p24 trafficking protein 10). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See tmed-10 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (11323965..11326964, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene putative RING finger protein 207 homolog Neighboring gene Seven TM Receptor Neighboring gene DUF1968 domain-containing protein Neighboring gene Glycoside hydrolase xylanase

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in Golgi organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in COPII-coated ER to Golgi transport vesicle IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in endoplasmic reticulum-Golgi intermediate compartment IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Transmembrane emp24 domain-containing protein bai
NP_505879.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    11323965..11326964 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073478.6NP_505879.1  Transmembrane emp24 domain-containing protein bai [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_505879.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20546
    Conserved Domains (1) summary
    pfam01105
    Location:16198
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD