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kup-1 Protein kup-1 [ Caenorhabditis elegans ]

Gene ID: 179651, updated on 2-Nov-2024

Summary

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Official Symbol
kup-1
Official Full Name
Protein kup-1
Primary source
WormBase:WBGene00002241
Locus tag
CELE_F10C2.2
See related
AllianceGenome:WB:WBGene00002241
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in germ line. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See kup-1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
8
Sequence:
Chromosome: V; NC_003283.11 (12032258..12040873, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Protein kinase C;Protein kinase C-like 1B Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pre-microRNA mir-87 Neighboring gene ncRNA Neighboring gene DNA polymerase delta catalytic subunit Neighboring gene alpha-1,2-Mannosidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Most Caenorhabditis elegans microRNAs are individually not essential for development or viability. Miska EA, et al. PLoS Genet, 2007 Dec. PMID 18085825, Free PMC Article
  2. Protein kinase C isotypes in C. elegans. Tabuse Y. J Biochem, 2002 Oct. PMID 12359064
  3. Operons in C. elegans: polycistronic mRNA precursors are processed by trans-splicing of SL2 to downstream coding regions. Spieth J, et al. Cell, 1993 May 7. PMID 8098272
  4. Codon usage in Caenorhabditis elegans: delineation of translational selection and mutational biases. Stenico M, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041603, Free PMC Article
  5. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Protein kup-1
NP_001379208.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    12032258..12040873 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001392622.1 → NP_001379208.1  Protein kup-1 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34705
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P34705.1

Gene LinkOut

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