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R07B7.2 PUM-HD domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 179654, updated on 18-Sep-2024

Summary

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Official Symbol
R07B7.2
Official Full Name
PUM-HD domain-containing protein
Primary source
WormBase:WBGene00011087
Locus tag
CELE_R07B7.2
See related
AllianceGenome:WB:WBGene00011087
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See R07B7.2 in Genome Data Viewer
Location:
chromosome: V
Exon count:
10
Sequence:
Chromosome: V; NC_003283.11 (12056562..12059753, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Aminoacyl-transfer RNA synthetases class-II family profile domain-containing protein Neighboring gene Major facilitator superfamily (MFS) profile domain-containing protein Neighboring gene Chloride channel protein Neighboring gene Prion-like-(Q/N-rich)-domain-bearing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Integrating interactome, phenome, and transcriptome mapping data for the C. elegans germline. Walhout AJ, et al. Curr Biol, 2002 Nov 19. PMID 12445390
  2. A combined binary interaction and phenotypic map of C. elegans cell polarity proteins. Koorman T, et al. Nat Cell Biol, 2016 Mar. PMID 26780296, Free PMC Article
  3. A protein domain-based interactome network for C. elegans early embryogenesis. Boxem M, et al. Cell, 2008 Aug 8. PMID 18692475, Free PMC Article
  4. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

General protein information

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Preferred Names
PUM-HD domain-containing protein
NP_001256397.1
  • Confirmed by transcript evidence
NP_001256398.1
  • Confirmed by transcript evidence
NP_001360521.1
  • Confirmed by transcript evidence
NP_001360522.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    12056562..12059753 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001373126.3 → NP_001360522.1  PUM-HD domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A486WYB4

  2. NM_001269469.3 → NP_001256398.1  PUM-HD domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256398.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EF98

  3. NM_001373127.2 → NP_001360521.1  PUM-HD domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A486WXC9

  4. NM_001269468.3 → NP_001256397.1  PUM-HD domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256397.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EBX2
Nucleotide Protein
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