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C27A7.5 ANK_REP_REGION domain-containing protein;asparaginase [ Caenorhabditis elegans ]

Gene ID: 179667, updated on 2-Nov-2024

Summary

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Official Symbol
C27A7.5
Official Full Name
ANK_REP_REGION domain-containing protein;asparaginase
Primary source
WormBase:WBGene00007756
Locus tag
CELE_C27A7.5
See related
AllianceGenome:WB:WBGene00007756
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable asparaginase activity. Predicted to be involved in aspartate family amino acid metabolic process. Orthologous to human ASPG (asparaginase). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C27A7.5 in Genome Data Viewer
Location:
chromosome: V
Exon count:
15
Sequence:
Chromosome: V; NC_003283.11 (12154867..12162320, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ShKT domain-containing protein;Thrombospondin type 1 domain protein Neighboring gene ShKT domain-containing protein Neighboring gene Serpentine Receptor, class J Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables asparaginase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables asparaginase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in aspartate family amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ANK_REP_REGION domain-containing protein;asparaginase
NP_001122863.1
  • Confirmed by transcript evidence
NP_001122864.1
  • Confirmed by transcript evidence
NP_506048.1
  • Confirmed by transcript evidence
NP_506049.1
  • Confirmed by transcript evidence
NP_506050.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    12154867..12162320 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073648.5 → NP_506049.1  asparaginase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_506049.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    P90758
    Conserved Domains (4) summary
    PLN03192
    Location:520 → 668
    PLN03192; Voltage-dependent potassium channel; Provisional
    sd00045
    Location:547 → 576
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:649 → 708
    Ank_2; Ankyrin repeats (3 copies)
    cl00216
    Location:121 → 477
    L-asparaginase_like; Bacterial L-asparaginases and related enzymes

  2. NM_001129392.3 → NP_001122864.1  asparaginase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001122864.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A5Z2U6
    Conserved Domains (4) summary
    PLN03192
    Location:491 → 639
    PLN03192; Voltage-dependent potassium channel; Provisional
    sd00045
    Location:518 → 547
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:620 → 679
    Ank_2; Ankyrin repeats (3 copies)
    cl00216
    Location:92 → 448
    L-asparaginase_like; Bacterial L-asparaginases and related enzymes

  3. NM_001129391.4 → NP_001122863.1  asparaginase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001122863.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A5Z2U5
    Conserved Domains (4) summary
    PLN03192
    Location:454 → 602
    PLN03192; Voltage-dependent potassium channel; Provisional
    sd00045
    Location:481 → 510
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:583 → 642
    Ank_2; Ankyrin repeats (3 copies)
    cl00216
    Location:55 → 411
    L-asparaginase_like; Bacterial L-asparaginases and related enzymes

  4. NM_073647.6 → NP_506048.1  asparaginase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_506048.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U3P0
    Conserved Domains (4) summary
    PLN03192
    Location:522 → 670
    PLN03192; Voltage-dependent potassium channel; Provisional
    sd00045
    Location:549 → 578
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:651 → 710
    Ank_2; Ankyrin repeats (3 copies)
    cl00216
    Location:123 → 479
    L-asparaginase_like; Bacterial L-asparaginases and related enzymes

  5. NM_073649.5 → NP_506050.1  ANK_REP_REGION domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_506050.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    P90759
Nucleotide Protein
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