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rpl-28 Large ribosomal subunit protein eL28 [ Caenorhabditis elegans ]

Gene ID: 179739, updated on 2-Nov-2024

Summary

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Official Symbol
rpl-28
Official Full Name
Large ribosomal subunit protein eL28
Primary source
WormBase:WBGene00004442
Locus tag
CELE_R11D1.8
See related
AllianceGenome:WB:WBGene00004442
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in several structures, including anal depressor muscle; excretory gland cell; intestine; nervous system; and reproductive system. Orthologous to human RPL28 (ribosomal protein L28). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See rpl-28 in Genome Data Viewer
Location:
chromosome: V
Exon count:
2
Sequence:
Chromosome: V; NC_003283.11 (12727635..12728112, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Seven TM Receptor Neighboring gene Cytoplasmic protein;Neuropeptide-Like Protein Neighboring gene DUF148 domain-containing protein Neighboring gene Large ribosomal subunit protein mL49 Neighboring gene FYVE-type domain-containing protein Neighboring gene L-xylulose reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Subsequent infection differentially affects the proteome of Caenorhabditis elegans by abrogating the intestinal cell proliferation. Udayakumar P, et al. Microb Pathog, 2022 Jan. PMID 34952153
  2. Protein Sequence Editing of SKN-1A/Nrf1 by Peptide:N-Glycanase Controls Proteasome Gene Expression. Lehrbach NJ, et al. Cell, 2019 Apr 18. PMID 31002798, Free PMC Article
  3. A PTEN variant uncouples longevity from impaired fitness in Caenorhabditis elegans with reduced insulin/IGF-1 signaling. Park HH, et al. Nat Commun, 2021 Sep 24. PMID 34561453, Free PMC Article
  4. Gut commensal E. coli outer membrane proteins activate the host food digestive system through neural-immune communication. Geng S, et al. Cell Host Microbe, 2022 Oct 12. PMID 36057258
  5. The ribonucleotidyl transferase USIP-1 acts with SART3 to promote U6 snRNA recycling. Rüegger S, et al. Nucleic Acids Res, 2015 Mar 31. PMID 25753661, Free PMC Article

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Large ribosomal subunit protein eL28
NP_001369954.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    12727635..12728112 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001383425.2 → NP_001369954.1  Large ribosomal subunit protein eL28 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q21930
    Conserved Domains (1) summary
    pfam01778
    Location:5 → 113
    Ribosomal_L28e; Ribosomal L28e protein family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q21930.3

Gene LinkOut

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