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bath-39 BTB and MATH domain-containing protein 39 [ Caenorhabditis elegans ]

Gene ID: 179827, updated on 18-Sep-2024

Summary

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Official Symbol
bath-39
Official Full Name
BTB and MATH domain-containing protein 39
Primary source
WormBase:WBGene00009137
Locus tag
CELE_F25H9.4
See related
AllianceGenome:WB:WBGene00009137
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See bath-39 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (13459459..13461803)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene UPAR/Ly6 domain-containing protein Neighboring gene DUF753 domain-containing protein Neighboring gene BTB domain-containing protein Neighboring gene FERM domain-containing protein 8 Neighboring gene Flavoprotein domain-containing protein Neighboring gene Succinate dehydrogenase assembly factor 3 Neighboring gene Secreted protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
BTB and MATH domain-containing protein 39
NP_506339.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    13459459..13461803
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073938.5 → NP_506339.2  BTB and MATH domain-containing protein 39 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_506339.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P90846
    Conserved Domains (2) summary
    smart00225
    Location:165 → 259
    BTB; Broad-Complex, Tramtrack and Bric a brac
    cd00121
    Location:16 → 141
    MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the membrane ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P90846.3

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