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mrps-35 Small ribosomal subunit protein mS35 mitochondrial conserved domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 180240, updated on 2-Nov-2024

Summary

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Official Symbol
mrps-35
Official Full Name
Small ribosomal subunit protein mS35 mitochondrial conserved domain-containing protein
Primary source
WormBase:WBGene00012697
Locus tag
CELE_Y39B6A.39
See related
AllianceGenome:WB:WBGene00012697
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Orthologous to human MRPS35 (mitochondrial ribosomal protein S35). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See mrps-35 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (18981306..18985865)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Major facilitator superfamily (MFS) profile domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene SWIM-type domain-containing protein Neighboring gene REPS (RalBP1-associated Eps domain-containing protein) homolog Neighboring gene Structural protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Synthetic lethal interactions identify phenotypic "interologs" of the spindle assembly checkpoint components. Tarailo M, et al. Genetics, 2007 Dec. PMID 18073444, Free PMC Article
  2. Functional identification of microRNA-centered complexes in C. elegans. Hebbar S, et al. Sci Rep, 2022 May 3. PMID 35504914, Free PMC Article
  3. RNA targets and specificity of Staufen, a double-stranded RNA-binding protein in Caenorhabditis elegans. LeGendre JB, et al. J Biol Chem, 2013 Jan 25. PMID 23195953, Free PMC Article
  4. Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity. Ceron J, et al. BMC Dev Biol, 2007 Apr 6. PMID 17417969, Free PMC Article
  5. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in mitochondrial translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of mitochondrial small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Small ribosomal subunit protein mS35 mitochondrial conserved domain-containing protein
NP_001256837.1
  • Confirmed by transcript evidence
NP_001256838.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    18981306..18985865
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001269908.5 → NP_001256837.1  Small ribosomal subunit protein mS35 mitochondrial conserved domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256837.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9NEI6
    Conserved Domains (1) summary
    cl39065
    Location:190 → 296
    MRP-S28; Mitochondrial ribosomal subunit protein

  2. NM_001269909.3 → NP_001256838.1  Small ribosomal subunit protein mS35 mitochondrial conserved domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256838.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D4YWC8
    Conserved Domains (1) summary
    cl39065
    Location:5 → 82
    MRP-S28; Mitochondrial ribosomal subunit protein
Nucleotide Protein
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