U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cnc-7 CaeNaCin (Caenorhabditis bacteriocin) [ Caenorhabditis elegans ]

Gene ID: 180337, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
cnc-7
Official Full Name
CaeNaCin (Caenorhabditis bacteriocin)
Primary source
WormBase:WBGene00010005
Locus tag
CELE_F53H2.2
See related
AllianceGenome:WB:WBGene00010005
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See cnc-7 in Genome Data Viewer
Location:
chromosome: V
Exon count:
2
Sequence:
Chromosome: V; NC_003283.11 (20394073..20394735)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Cilia- and flagella-associated protein 251-like Neighboring gene Protein containing ALS2cr12 (ALS2CR12) signature;SH2 domain-containing protein Neighboring gene ncRNA Neighboring gene WW domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene CAAX prenyl protease 2 homolog

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Assessment of nanopolystyrene toxicity under fungal infection condition in Caenorhabditis elegans. Li D, et al. Ecotoxicol Environ Saf, 2020 Jul 1. PMID 32302863
  2. Candida albicans infection of Caenorhabditis elegans induces antifungal immune defenses. Pukkila-Worley R, et al. PLoS Pathog, 2011 Jun. PMID 21731485, Free PMC Article
  3. Anti-fungal innate immunity in C. elegans is enhanced by evolutionary diversification of antimicrobial peptides. Pujol N, et al. PLoS Pathog, 2008 Jul 18. PMID 18636113, Free PMC Article
  4. Innate Immunity Promotes Sleep through Epidermal Antimicrobial Peptides. Sinner MP, et al. Curr Biol, 2021 Feb 8. PMID 33259791
  5. An ECM-to-Nucleus Signaling Pathway Activates Lysosomes for C. elegans Larval Development. Miao R, et al. Dev Cell, 2020 Jan 6. PMID 31735670

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
CaeNaCin (Caenorhabditis bacteriocin)
NP_507930.1
  • Product from WormBase gene class cnc;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    20394073..20394735
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_075529.5 → NP_507930.1  CaeNaCin (Caenorhabditis bacteriocin) [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_507930.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U3E5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools