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Y44A6D.5 Branched-chain-amino-acid aminotransferase [ Caenorhabditis elegans ]

Gene ID: 180361, updated on 2-Nov-2024

Summary

Official Symbol
Y44A6D.5
Official Full Name
Branched-chain-amino-acid aminotransferase
Primary source
WormBase:WBGene00012855
Locus tag
CELE_Y44A6D.5
See related
AllianceGenome:WB:WBGene00012855
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable branched-chain-amino-acid transaminase activity. Predicted to be involved in L-leucine biosynthetic process and L-valine biosynthetic process. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in hypervalinemia and hyperleucine-isoleucinemia. Orthologous to human BCAT2 (branched chain amino acid transaminase 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See Y44A6D.5 in Genome Data Viewer
Location:
chromosome: V
Exon count:
7
Sequence:
Chromosome: V; NC_003283.11 (20801184..20803006, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Antitoxin Neighboring gene Brinker DNA-binding domain-containing protein Neighboring gene Protein sdf-9 Neighboring gene Transmembrane protein Neighboring gene Bm594

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables L-isoleucine-2-oxoglutarate transaminase activity IEA
Inferred from Electronic Annotation
more info
 
enables L-leucine-2-oxoglutarate transaminase activity IEA
Inferred from Electronic Annotation
more info
 
enables L-valine-2-oxoglutarate transaminase activity IEA
Inferred from Electronic Annotation
more info
 
enables branched-chain-amino-acid transaminase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables branched-chain-amino-acid transaminase activity IEA
Inferred from Electronic Annotation
more info
 
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 
enables transaminase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in L-leucine biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in L-valine biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in amino acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
involved_in branched-chain amino acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
involved_in branched-chain amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
Branched-chain-amino-acid aminotransferase
NP_508014.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    20801184..20803006 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_075613.4NP_508014.1  Branched-chain-amino-acid aminotransferase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_508014.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XXD8
    Conserved Domains (2) summary
    PRK13357
    Location:31392
    PRK13357; branched-chain amino acid aminotransferase; Provisional
    cd01557
    Location:80380
    BCAT_beta_family; BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and ...