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H11E01.3 Serine-rich adhesin for platelets;Serine/arginine repetitive matrix protein 2 [ Caenorhabditis elegans ]

Gene ID: 180495, updated on 18-Sep-2024

Summary

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Official Symbol
H11E01.3
Official Full Name
Serine-rich adhesin for platelets;Serine/arginine repetitive matrix protein 2
Primary source
WormBase:WBGene00019188
Locus tag
CELE_H11E01.3
See related
AllianceGenome:WB:WBGene00019188
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See H11E01.3 in Genome Data Viewer
Location:
chromosome: X
Exon count:
12
Sequence:
Chromosome: X; NC_003284.9 (1604906..1619151)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene WaRThog (hedgehog-like family) Neighboring gene tRNA-Ile Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene tRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Serine-rich adhesin for platelets;Serine/arginine repetitive matrix protein 2
NP_001368766.1
  • Confirmed by transcript evidence
NP_001368767.1
  • Confirmed by transcript evidence
NP_001368771.1
  • Confirmed by transcript evidence
NP_001380258.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    1604906..1619151
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001380918.3 → NP_001368771.1  Serine/arginine repetitive matrix protein 2 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5E4LWT0
    Conserved Domains (2) summary
    COG5422
    Location:703 → 919
    ROM1; RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms]
    PRK14949
    Location:331 → 667
    PRK14949; DNA polymerase III subunits gamma and tau; Provisional

  2. NM_001380915.1 → NP_001368767.1  Serine-rich adhesin for platelets [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5E4LZG5
    Conserved Domains (2) summary
    COG5422
    Location:775 → 991
    ROM1; RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms]
    PRK14949
    Location:403 → 739
    PRK14949; DNA polymerase III subunits gamma and tau; Provisional

  3. NM_001380916.1 → NP_001368766.1  Serine-rich adhesin for platelets [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5E4M3B1
    Conserved Domains (2) summary
    COG5422
    Location:756 → 972
    ROM1; RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms]
    PRK14949
    Location:384 → 720
    PRK14949; DNA polymerase III subunits gamma and tau; Provisional

  4. NM_001392730.1 → NP_001380258.1  Serine/arginine repetitive matrix protein 2 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5E4LWF5
    Conserved Domains (2) summary
    COG5422
    Location:722 → 938
    ROM1; RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms]
    PRK14949
    Location:350 → 686
    PRK14949; DNA polymerase III subunits gamma and tau; Provisional
Nucleotide Protein
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