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bus-5 NAD(P)-binding domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 180525, updated on 2-Nov-2024

Summary

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Official Symbol
bus-5
Official Full Name
NAD(P)-binding domain-containing protein
Primary source
WormBase:WBGene00044621
Locus tag
CELE_F53B1.4
See related
AllianceGenome:WB:WBGene00044621
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in hypodermis; intestine; and rectum. Human ortholog(s) of this gene implicated in Catel Manzke syndrome. Orthologous to human TGDS (TDP-glucose 4,6-dehydratase). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See bus-5 in Genome Data Viewer
Location:
chromosome: X
Exon count:
6
Sequence:
Chromosome: X; NC_003284.9 (2111397..2113104, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Conserved plasma membrane protein Neighboring gene Sphingomyelin synthase-related 1 Neighboring gene Metallo-beta-lactamase domain-containing protein 1 Neighboring gene Guanine nucleotide-binding protein alpha-5 subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Acute, reproductive, and developmental toxicity of essential oils assessed with alternative in vitro and in vivo systems. Lanzerstorfer P, et al. Arch Toxicol, 2021 Feb. PMID 33159585, Free PMC Article
  2. Acquired stress resilience through bacteria-to-nematode interdomain horizontal gene transfer. Pandey T, et al. EMBO J, 2023 Dec 11. PMID 37953666,
  3. The hmsHFRS operon of Xenorhabdus nematophila is required for biofilm attachment to Caenorhabditis elegans. Drace K, et al. Appl Environ Microbiol, 2008 Jul. PMID 18515487, Free PMC Article
  4. Caenorhabditis elegans mutants resistant to attachment of Yersinia biofilms. Darby C, et al. Genetics, 2007 May. PMID 17339204, Free PMC Article
  5. Multiple genes affect sensitivity of Caenorhabditis elegans to the bacterial pathogen Microbacterium nematophilum. Gravato-Nobre MJ, et al. Genetics, 2005 Nov. PMID 16079230, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables dTDP-glucose 4,6-dehydratase activity IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
NAD(P)-binding domain-containing protein
NP_508390.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    2111397..2113104 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_075989.3 → NP_508390.1  NAD(P)-binding domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_508390.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20697
    Conserved Domains (1) summary
    cd05246
    Location:9 → 334
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs
Nucleotide Protein
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