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mtpn-1 ANK_REP_REGION domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 180545, updated on 2-Nov-2024

Summary

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Official Symbol
mtpn-1
Official Full Name
ANK_REP_REGION domain-containing protein
Primary source
WormBase:WBGene00016616
Locus tag
CELE_C43H6.3
See related
AllianceGenome:WB:WBGene00016616
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in regulation of barbed-end actin filament capping. Predicted to be active in cytoplasm and nucleus. Orthologous to human MTPN (myotrophin). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See mtpn-1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
3
Sequence:
Chromosome: X; NC_003284.9 (2407467..2409567)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene C-type LECtin Neighboring gene Palmitoyltransferase Neighboring gene PH domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene TRansport Protein Particle Neighboring gene Helix-loop-helix protein 15

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  3. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in regulation of barbed-end actin filament capping IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
ANK_REP_REGION domain-containing protein
NP_001379799.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    2407467..2409567
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001392734.1 → NP_001379799.1  ANK_REP_REGION domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q18587
    Conserved Domains (2) summary
    sd00045
    Location:29 → 60
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:7 → 88
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
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