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F40F4.7 N-terminal methionine N(alpha)-acetyltransferase NatE [ Caenorhabditis elegans ]

Gene ID: 180614, updated on 2-Nov-2024

Summary

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Official Symbol
F40F4.7
Official Full Name
N-terminal methionine N(alpha)-acetyltransferase NatE
Primary source
WormBase:WBGene00018238
Locus tag
CELE_F40F4.7
See related
AllianceGenome:WB:WBGene00018238
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable acyltransferase activity, transferring groups other than amino-acyl groups. Predicted to be involved in mitotic sister chromatid cohesion. Predicted to be located in cytoplasm. Predicted to be part of NatA complex. Orthologous to human NAA50 (N-alpha-acetyltransferase 50, NatE catalytic subunit). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F40F4.7 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Sequence:
Chromosome: X; NC_003284.9 (3243886..3245933, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene C-type LECtin Neighboring gene Protein irg-7 Neighboring gene Prion-like-(Q/N-rich)-domain-bearing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in mitotic sister chromatid cohesion IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of NatA complex IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
N-terminal methionine N(alpha)-acetyltransferase NatE
NP_001379902.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    3243886..3245933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001392743.1 → NP_001379902.1  N-terminal methionine N(alpha)-acetyltransferase NatE [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20220
    Conserved Domains (1) summary
    COG0456
    Location:122 → 245
    RimI; Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
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