U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

vit-5 Vitellogenin-5 [ Caenorhabditis elegans ]

Gene ID: 180630, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
vit-5
Official Full Name
Vitellogenin-5
Primary source
WormBase:WBGene00006929
Locus tag
CELE_C04F6.1
See related
AllianceGenome:WB:WBGene00006929
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable lipid transporter activity. Predicted to be involved in lipid transport. Predicted to be located in extracellular region. Is expressed in intestine. [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See vit-5 in Genome Data Viewer
Location:
chromosome: X
Exon count:
6
Sequence:
Chromosome: X; NC_003284.9 (3403471..3408603)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Major facilitator superfamily (MFS) profile domain-containing protein Neighboring gene putative endochitinase Neighboring gene Gag-pol polyprotein Neighboring gene Actin-interacting protein 1 Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Production of YP170 Vitellogenins Promotes Intestinal Senescence in Caenorhabditis elegans. Sornda T, et al. J Gerontol A Biol Sci Med Sci, 2019 Jul 12. PMID 30854561, Free PMC Article
  2. Comparison of a vitellogenin gene between two distantly related rhabditid nematode species. Winter CE, et al. Mol Biol Evol, 1996 May. PMID 8676742
  3. Alternatively spliced transcripts of the flp-1 gene encode distinct FMRFamide-like peptides in Caenorhabditis elegans. Rosoff ML, et al. J Neurosci, 1992 Jun. PMID 1607945, Free PMC Article
  4. Regulation of lipoprotein assembly, secretion and fatty acid β-oxidation by Krüppel-like transcription factor, klf-3. Zhang J, et al. J Mol Biol, 2013 Aug 9. PMID 23639358, Free PMC Article
  5. Multi-omics Analyses of Starvation Responses Reveal a Central Role for Lipoprotein Metabolism in Acute Starvation Survival in C. elegans. Harvald EB, et al. Cell Syst, 2017 Jul 26. PMID 28734827

See all (58) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables lipid transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables lipid transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables nutrient reservoir activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Vitellogenin-5
NP_508589.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    3403471..3408603
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_076188.7 → NP_508589.1  Vitellogenin-5 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_508589.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P06125
    Conserved Domains (3) summary
    smart00216
    Location:1300 → 1454
    VWD; von Willebrand factor (vWF) type D domain
    pfam01347
    Location:24 → 617
    Vitellogenin_N; Lipoprotein amino terminal region
    pfam09172
    Location:651 → 942
    DUF1943; Domain of unknown function (DUF1943)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P06125.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials
Tools