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F48D6.4 28S ribosomal protein S36, mitochondrial;39S ribosomal protein L52, mitochondrial;NADH-ubiquinone oxidoreductase subunit [ Caenorhabditis elegans ]

Gene ID: 180697, updated on 2-Nov-2024

Summary

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Official Symbol
F48D6.4
Official Full Name
28S ribosomal protein S36, mitochondrial;39S ribosomal protein L52, mitochondrial;NADH-ubiquinone oxidoreductase subunit
Primary source
WormBase:WBGene00018602
Locus tag
CELE_F48D6.4
See related
AllianceGenome:WB:WBGene00018602
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in ribosome. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F48D6.4 in Genome Data Viewer
Location:
chromosome: X
Exon count:
3
Sequence:
Chromosome: X; NC_003284.9 (4246554..4247212, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Helix-loop-helix protein 13 Neighboring gene Serpentine receptor class gamma

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
  2. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
28S ribosomal protein S36, mitochondrial;39S ribosomal protein L52, mitochondrial;NADH-ubiquinone oxidoreductase subunit
NP_508722.1
  • Confirmed by transcript evidence
NP_508723.1
  • Confirmed by transcript evidence
NP_508724.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    4246554..4247212 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_076323.8 → NP_508724.1  NADH-ubiquinone oxidoreductase subunit [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_508724.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZD9

  2. NM_076322.6 → NP_508723.1  39S ribosomal protein L52, mitochondrial [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_508723.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZE0

  3. NM_076321.7 → NP_508722.1  28S ribosomal protein S36, mitochondrial [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_508722.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20560
Nucleotide Protein
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