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sups-1 SUppressor of Pkc-3 (pkc-3) Sterility [ Caenorhabditis elegans ]

Gene ID: 180868, updated on 2-Nov-2024

Summary

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Official Symbol
sups-1
Official Full Name
SUppressor of Pkc-3 (pkc-3) Sterility
Primary source
WormBase:WBGene00017716
Locus tag
CELE_F22F4.1
See related
AllianceGenome:WB:WBGene00017716
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in hypodermis. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See sups-1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
12
Sequence:
Chromosome: X; NC_003284.9 (6004153..6007096)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Innexin-3 Neighboring gene CC domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Conserved plasma membrane protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Role of pkc-3 and Genetic Suppressors in Caenorhabditis elegans Epithelial Cell Junction Formation. Montoyo-Rosario JG, et al. Genetics, 2020 Apr. PMID 32005655, Free PMC Article
  2. Protein phosphatase 2A is crucial for sarcomere organization in Caenorhabditis elegans striated muscle. Qadota H, et al. Mol Biol Cell, 2018 Aug 15. PMID 29949401, Free PMC Article
  3. Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity. Ceron J, et al. BMC Dev Biol, 2007 Apr 6. PMID 17417969, Free PMC Article
  4. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
SUppressor of Pkc-3 (pkc-3) Sterility
NP_509004.1
  • Confirmed by transcript evidence;
    Product from WormBase gene class sups

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    6004153..6007096
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_076603.6 → NP_509004.1  SUppressor of Pkc-3 (pkc-3) Sterility [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_509004.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q17844, Q19748
Nucleotide Protein
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