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ttr-35 Transthyretin-like family protein [ Caenorhabditis elegans ]

Gene ID: 180925, updated on 2-Nov-2024

Summary

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Official Symbol
ttr-35
Official Full Name
Transthyretin-like family protein
Primary source
WormBase:WBGene00017688
Locus tag
CELE_F22A3.2
See related
AllianceGenome:WB:WBGene00017688
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in cell surface and extracellular region. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ttr-35 in Genome Data Viewer
Location:
chromosome: X
Exon count:
3
Sequence:
Chromosome: X; NC_003284.9 (6512285..6512918)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Ionotropic glutamate receptor L-glutamate and glycine-binding domain-containing protein Neighboring gene ncRNA Neighboring gene Transthyretin-like family protein Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An integrated strategy to study muscle development and myofilament structure in Caenorhabditis elegans. Meissner B, et al. PLoS Genet, 2009 Jun. PMID 19557190, Free PMC Article
  2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
  
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Transthyretin-like family protein
NP_509098.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    6512285..6512918
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_076697.7 → NP_509098.2  Transthyretin-like family protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_509098.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q19694
    Conserved Domains (1) summary
    pfam01060
    Location:32 → 111
    TTR-52; Transthyretin-like family
Nucleotide Protein
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