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clec-266 C-type lectin domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 180932, updated on 2-Nov-2024

Summary

Official Symbol
clec-266
Official Full Name
C-type lectin domain-containing protein
Primary source
WormBase:WBGene00016088
Locus tag
CELE_C25B8.4
See related
AllianceGenome:WB:WBGene00016088
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable carbohydrate binding activity and pattern recognition receptor activity. Predicted to be involved in immune response. Predicted to be located in membrane. Predicted to be active in external side of plasma membrane. Is expressed in intestinal cell. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See clec-266 in Genome Data Viewer
Location:
chromosome: X
Exon count:
6
Sequence:
Chromosome: X; NC_003284.9 (6617393..6622915, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Cathepsin B-like cysteine proteinase 6 Neighboring gene Claudin domain-containing protein 2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Potassium voltage-gated channel subfamily KQT member 5 Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables carbohydrate binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables pattern recognition receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in immune response IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in external side of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
C-type lectin domain-containing protein
NP_001024427.1
  • Confirmed by transcript evidence
NP_001024428.1
  • Confirmed by transcript evidence
NP_001379719.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    6617393..6622915 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001029256.4NP_001024427.1  C-type lectin domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001024427.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZ06
    Conserved Domains (1) summary
    smart00034
    Location:58195
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
  2. NM_001392791.1NP_001379719.1  C-type lectin domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7Z121
    Conserved Domains (1) summary
    smart00034
    Location:58121
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
  3. NM_001029257.5NP_001024428.1  C-type lectin domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001024428.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZ07
    Conserved Domains (1) summary
    smart00034
    Location:94231
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)