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F41B4.1 ZM domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 180952, updated on 18-Sep-2024

Summary

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Official Symbol
F41B4.1
Official Full Name
ZM domain-containing protein
Primary source
WormBase:WBGene00018257
Locus tag
CELE_F41B4.1
See related
AllianceGenome:WB:WBGene00018257
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See F41B4.1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
4
Sequence:
Chromosome: X; NC_003284.9 (6823885..6825862, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Autophagy-related protein 2 Neighboring gene SCP2 domain-containing protein Neighboring gene GEX Interacting protein Neighboring gene Secreted protein Neighboring gene Proteobacterial sortase system OmpA family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Shifted Transversal Design smart-pooling for high coverage interactome mapping. Xin X, et al. Genome Res, 2009 Jul. PMID 19447967, Free PMC Article
  2. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article
  3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 

General protein information

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Preferred Names
ZM domain-containing protein
NP_509148.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    6823885..6825862 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_076747.6 → NP_509148.2  ZM domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_509148.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q966J6
    Conserved Domains (1) summary
    PRK13914
    Location:162 → 279
    PRK13914; invasion associated secreted endopeptidase; Provisional
Nucleotide Protein
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