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unk-1 C3H1-type domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 181059, updated on 2-Nov-2024

Summary

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Official Symbol
unk-1
Official Full Name
C3H1-type domain-containing protein
Primary source
WormBase:WBGene00016407
Locus tag
CELE_C34D10.2
See related
AllianceGenome:WB:WBGene00016407
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable metal ion binding activity. Predicted to be located in cytoplasm. Orthologous to several human genes including UNKL (unk like zinc finger). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See unk-1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
15
Sequence:
Chromosome: X; NC_003284.9 (8014983..8026868)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene KfrA_N domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Truncated env protein Neighboring gene ncRNA Neighboring gene MSP domain-containing protein Neighboring gene ncRNA Neighboring gene tRNA-Arg

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Reduced bone morphogenic protein signaling along the gut-neuron axis by heat shock factor promotes longevity. Arneaud SLB, et al. Aging Cell, 2022 Sep. PMID 35977034, Free PMC Article
  2. Conservation of caspase substrates across metazoans suggests hierarchical importance of signaling pathways over specific targets and cleavage site motifs in apoptosis. Crawford ED, et al. Cell Death Differ, 2012 Dec. PMID 22918439, Free PMC Article
  3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  4. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  5. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
C3H1-type domain-containing protein
NP_001263959.1
  • Confirmed by transcript evidence
NP_001361954.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    8014983..8026868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001375079.3 → NP_001361954.1  C3H1-type domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q18437
    Conserved Domains (1) summary
    pfam18384
    Location:36 → 74
    zf_CCCH_5; Unkempt Zinc finger domain 1 (Znf1)

  2. NM_001277030.5 → NP_001263959.1  C3H1-type domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001263959.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    L8E6Y3
Nucleotide Protein
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