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F49E2.2 SH3 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 181177, updated on 18-Sep-2024

Summary

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Official Symbol
F49E2.2
Official Full Name
SH3 domain-containing protein
Primary source
WormBase:WBGene00009886
Locus tag
CELE_F49E2.2
See related
AllianceGenome:WB:WBGene00009886
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See F49E2.2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
12
Sequence:
Chromosome: X; NC_003284.9 (9567296..9573659)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene tRNA-Val Neighboring gene GTP 3',8-cyclase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Globin domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article
  2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
SH3 domain-containing protein
NP_001123147.1
  • Confirmed by transcript evidence
NP_001379061.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    9567296..9573659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001129675.5 → NP_001123147.1  SH3 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001123147.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A6ZJ46
    Conserved Domains (1) summary
    smart00326
    Location:524 → 574
    SH3; Src homology 3 domains

  2. NM_001392825.1 → NP_001379061.1  SH3 domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20621
    Conserved Domains (1) summary
    smart00326
    Location:470 → 520
    SH3; Src homology 3 domains
Nucleotide Protein
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