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F28H6.4 SPK domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 181522, updated on 18-Sep-2024

Summary

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Official Symbol
F28H6.4
Official Full Name
SPK domain-containing protein
Primary source
WormBase:WBGene00009233
Locus tag
CELE_F28H6.4
See related
AllianceGenome:WB:WBGene00009233
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See F28H6.4 in Genome Data Viewer
Location:
chromosome: X
Exon count:
13
Sequence:
Chromosome: X; NC_003284.9 (14127872..14133528)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene CYSTM domain-containing protein Neighboring gene Homeobox domain-containing protein Neighboring gene Ovule protein Neighboring gene tRNA-His

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
SPK domain-containing protein
NP_510354.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    14127872..14133528
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_077953.6 → NP_510354.1  SPK domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_510354.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U3H5
    Conserved Domains (2) summary
    smart00583
    Location:367 → 476
    SPK; domain in SET and PHD domain containing proteins and protein kinases
    cl11619
    Location:103 → 180
    SPK; Domain of unknown function (DUF545)
Nucleotide Protein
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