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nac-1 Sodium-dependent low-affinity dicarboxylate transporter 1 [ Caenorhabditis elegans ]

Gene ID: 181585, updated on 2-Nov-2024

Summary

Official Symbol
nac-1
Official Full Name
Sodium-dependent low-affinity dicarboxylate transporter 1
Primary source
WormBase:WBGene00003517
Locus tag
CELE_F31F6.6
See related
AllianceGenome:WB:WBGene00003517
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Enables low-affinity sodium:dicarboxylate symporter activity and succinate transmembrane transporter activity. Involved in succinate transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in alimentary system. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 25. Orthologous to several human genes including SLC13A2 (solute carrier family 13 member 2) and SLC13A5 (solute carrier family 13 member 5). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See nac-1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
11
Sequence:
Chromosome: X; NC_003284.9 (14895145..14898449)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene SSD domain-containing protein Neighboring gene Lipase Neighboring gene beta-N-acetylhexosaminidase

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables citrate transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables low-affinity sodium:dicarboxylate symporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables succinate transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables succinate transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables symporter activity IEA
Inferred from Electronic Annotation
more info
 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in citrate transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in sodium ion transport IEA
Inferred from Electronic Annotation
more info
 
involved_in succinate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in succinate transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in succinate transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
Sodium-dependent low-affinity dicarboxylate transporter 1
NP_510473.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    14895145..14898449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_078072.6NP_510473.2  Sodium-dependent low-affinity dicarboxylate transporter 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_510473.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q86R86, Q93655
    Conserved Domains (2) summary
    COG0471
    Location:19547
    CitT; Di- and tricarboxylate transporter [Carbohydrate transport and metabolism]
    cd01115
    Location:45544
    SLC13_permease; Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is ...