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C33A11.2 Aa_trans domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 181626, updated on 2-Nov-2024

Summary

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Official Symbol
C33A11.2
Official Full Name
Aa_trans domain-containing protein
Primary source
WormBase:WBGene00007878
Locus tag
CELE_C33A11.2
See related
AllianceGenome:WB:WBGene00007878
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Is expressed in several structures, including CAN; gonad; head; pharyngeal cell; and tail. Human ortholog(s) of this gene implicated in cone-rod dystrophy 21. Orthologous to several human genes including DRAM2 (DNA damage regulated autophagy modulator 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C33A11.2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Sequence:
Chromosome: X; NC_003284.9 (15365992..15369999)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ANK repeat-containing protein nipk-1 Neighboring gene ncRNA Neighboring gene tRNA Neighboring gene ETS domain-containing protein;Ets-domain protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Aa_trans domain-containing protein
NP_510541.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    15365992..15369999
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_078140.8 → NP_510541.1  Aa_trans domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_510541.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q93319
    Conserved Domains (1) summary
    pfam10277
    Location:9 → 241
    Frag1; Frag1/DRAM/Sfk1 family
Nucleotide Protein
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