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olrn-1 G_PROTEIN_RECEP_F1_2 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 181642, updated on 2-Nov-2024

Summary

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Official Symbol
olrn-1
Official Full Name
G_PROTEIN_RECEP_F1_2 domain-containing protein
Primary source
WormBase:WBGene00007260
Locus tag
CELE_C02C6.2
See related
AllianceGenome:WB:WBGene00007260
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in olfactory learning. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in head neurons; pharyngeal cell; and rectal gland cell. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See olrn-1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
8
Sequence:
Chromosome: X; NC_003284.9 (15537662..15546712)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene LRRCT domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Innate Immunity in the C. elegans Intestine Is Programmed by a Neuronal Regulator of AWC Olfactory Neuron Development. Foster KJ, et al. Cell Rep, 2020 Apr 7. PMID 32268082, Free PMC Article
  2. Left-right olfactory asymmetry results from antagonistic functions of voltage-activated calcium channels and the Raw repeat protein OLRN-1 in C. elegans. Bauer Huang SL, et al. Neural Dev, 2007 Nov 6. PMID 17986337, Free PMC Article
  3. Caenorhabditis elegans integrates the signals of butanone and food to enhance chemotaxis to butanone. Torayama I, et al. J Neurosci, 2007 Jan 24. PMID 17251413, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Innate Immunity in the C. elegans Intestine Is Programmed by a Neuronal Regulator of AWC Olfactory Neuron Development.
    Title: Innate Immunity in the C. elegans Intestine Is Programmed by a Neuronal Regulator of AWC Olfactory Neuron Development.
Submit: New GeneRIF Correction

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in olfactory learning IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
G_PROTEIN_RECEP_F1_2 domain-containing protein
NP_001024334.1
  • Confirmed by transcript evidence
NP_001359691.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    15537662..15546712
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001373597.2 → NP_001359691.1  G_PROTEIN_RECEP_F1_2 domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q564X8
    Conserved Domains (1) summary
    pfam15891
    Location:79 → 164
    Nuc_deoxyri_tr2; Nucleoside 2-deoxyribosyltransferase like

  2. NM_001029163.8 → NP_001024334.1  G_PROTEIN_RECEP_F1_2 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001024334.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q93174
    Conserved Domains (1) summary
    cl23749
    Location:75 → 162
    TIR_2; TIR domain
Nucleotide Protein
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