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K09A9.6 Aspartyl/asparaginy/proline hydroxylase domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 181645, updated on 2-Nov-2024

Summary

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Official Symbol
K09A9.6
Official Full Name
Aspartyl/asparaginy/proline hydroxylase domain-containing protein
Primary source
WormBase:WBGene00010703
Locus tag
CELE_K09A9.6
See related
AllianceGenome:WB:WBGene00010703
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable peptidyl-aspartic acid 3-dioxygenase activity. Predicted to be involved in regulation of cytosolic calcium ion concentration. Predicted to be located in membrane. Predicted to be active in endoplasmic reticulum. Is expressed in anal depressor muscle; body wall musculature; nervous system; and reproductive system. Human ortholog(s) of this gene implicated in cholangiocarcinoma. Orthologous to human ASPH (aspartate beta-hydroxylase). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See K09A9.6 in Genome Data Viewer
Location:
chromosome: X
Exon count:
15
Sequence:
Chromosome: X; NC_003284.9 (15577242..15586811)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Dynamin Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene putative NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in peptidyl-amino acid modification IEA
Inferred from Electronic Annotation
more info
  
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of cytosolic calcium ion concentration IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Aspartyl/asparaginy/proline hydroxylase domain-containing protein
NP_001123163.1
  • Confirmed by transcript evidence
NP_510568.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    15577242..15586811
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_078167.7 → NP_510568.1  Aspartyl/asparaginy/proline hydroxylase domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_510568.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EEF4
    Conserved Domains (3) summary
    TIGR02917
    Location:461 → 634
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:597 → 628
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:703 → 859
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  2. NM_001129691.5 → NP_001123163.1  Aspartyl/asparaginy/proline hydroxylase domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001123163.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8WHT8
    Conserved Domains (3) summary
    TIGR02917
    Location:509 → 682
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:645 → 676
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:751 → 907
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
Nucleotide Protein
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