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nipi-3 Protein nipi-3 [ Caenorhabditis elegans ]

Gene ID: 181650, updated on 2-Nov-2024

Summary

Official Symbol
nipi-3
Official Full Name
Protein nipi-3
Primary source
WormBase:WBGene00010700
Locus tag
CELE_K09A9.1
See related
AllianceGenome:WB:WBGene00010700
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Enables DNA-binding transcription factor binding activity. Involved in defense response to other organism and regulation of gene expression. Predicted to be active in nucleus. Is expressed in several structures, including hypodermis; intestine; neurons; pharynx; and spermatheca. Orthologous to human TRIB1 (tribbles pseudokinase 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See nipi-3 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Sequence:
Chromosome: X; NC_003284.9 (15607969..15610623)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Equilibrative nucleoside transporter 3 Neighboring gene Ras-related protein Rab-14 Neighboring gene Transcription initiation factor TFIID subunit 5 Neighboring gene Endoplasmic reticulum-Golgi intermediate compartment protein 3

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA-binding transcription factor binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables mitogen-activated protein kinase kinase binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Protein nipi-3
NP_510573.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    15607969..15610623
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_078172.10NP_510573.3  Protein nipi-3 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_510573.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    G5EED4
    Conserved Domains (1) summary
    cl21453
    Location:208459
    PKc_like; Protein Kinases, catalytic domain