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T23E7.2 Aggrecan core protein;Fibronectin type-III domain-containing protein;Glycosyltransferase;Rab-GAP TBC domain-containing protein;Uncharacterized protein [ Caenorhabditis elegans ]

Gene ID: 181789, updated on 28-Oct-2024

Summary

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Official Symbol
T23E7.2
Official Full Name
Aggrecan core protein;Fibronectin type-III domain-containing protein;Glycosyltransferase;Rab-GAP TBC domain-containing protein;Uncharacterized protein
Primary source
WormBase:WBGene00020732
Locus tag
CELE_T23E7.2
See related
AllianceGenome:WB:WBGene00020732
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See T23E7.2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
17
Sequence:
Chromosome: X; NC_003284.9 (17671027..17680828)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Neuropeptide-Like Protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Symporter YagG Neighboring gene Ceramide glucosyltransferase 2 Neighboring gene ncRNA Neighboring gene Telomerase-binding protein EST1A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Robust co-immunoprecipitation with mass spectrometry for Caenorhabditis elegans using solid-phase enhanced sample preparation. Baytek G, et al. Biotechniques, 2022 May. PMID 35297663
  2. The Caenorhabditis elegans RDE-10/RDE-11 complex regulates RNAi by promoting secondary siRNA amplification. Zhang C, et al. Curr Biol, 2012 May 22. PMID 22542102, Free PMC Article
  3. FACT Sets a Barrier for Cell Fate Reprogramming in Caenorhabditis elegans and Human Cells. Kolundzic E, et al. Dev Cell, 2018 Sep 10. PMID 30078731, Free PMC Article
  4. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
  5. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Aggrecan core protein;Fibronectin type-III domain-containing protein;Glycosyltransferase;Rab-GAP TBC domain-containing protein;Uncharacterized protein
NP_001360149.1
  • Confirmed by transcript evidence
NP_001362045.1
  • Confirmed by transcript evidence
NP_001362054.1
  • Confirmed by transcript evidence
NP_001362138.1
  • Confirmed by transcript evidence
NP_001362139.1
  • Confirmed by transcript evidence
NP_001362140.1
  • Confirmed by transcript evidence
NP_001362141.1
  • Confirmed by transcript evidence
NP_001362142.1
  • Confirmed by transcript evidence
NP_001362143.1
  • Confirmed by transcript evidence
NP_001370871.1
  • Confirmed by transcript evidence
NP_510852.2
  • Confirmed by transcript evidence
NP_510853.2
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    17671027..17680828
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001383705.1 → NP_001370871.1  Uncharacterized protein CELE_T23E7.2 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZS5

  2. NM_001373636.3 → NP_001360149.1  Aggrecan core protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MXJ1
    Conserved Domains (2) summary
    PHA03247
    Location:261 → 459
    PHA03247; large tegument protein UL36; Provisional
    PRK14950
    Location:309 → 395
    PRK14950; DNA polymerase III subunits gamma and tau; Provisional

  3. NM_078451.5 → NP_510852.2  Aggrecan core protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_510852.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZS2
    Conserved Domains (1) summary
    pfam10310
    Location:262 → 407
    DUF2413; Protein of unknown function (DUF2413)

  4. NM_001375214.2 → NP_001362045.1  Fibronectin type-III domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZS3
    Conserved Domains (2) summary
    PHA03247
    Location:211 → 409
    PHA03247; large tegument protein UL36; Provisional
    PRK14950
    Location:248 → 345
    PRK14950; DNA polymerase III subunits gamma and tau; Provisional

  5. NM_001375218.3 → NP_001362054.1  Aggrecan core protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    L8E6J9
    Conserved Domains (2) summary
    PHA03247
    Location:261 → 459
    PHA03247; large tegument protein UL36; Provisional
    PRK14950
    Location:309 → 395
    PRK14950; DNA polymerase III subunits gamma and tau; Provisional

  6. NM_001375211.2 → NP_001362138.1  Aggrecan core protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5E4M2N5
    Conserved Domains (2) summary
    PHA03247
    Location:261 → 459
    PHA03247; large tegument protein UL36; Provisional
    PRK14950
    Location:298 → 395
    PRK14950; DNA polymerase III subunits gamma and tau; Provisional

  7. NM_001375212.2 → NP_001362139.1  Aggrecan core protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5E4LZC5
    Conserved Domains (2) summary
    PHA03307
    Location:261 → 557
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:261 → 379
    PRK07003; DNA polymerase III subunit gamma/tau

  8. NM_001375213.2 → NP_001362140.1  Aggrecan core protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5E4LX00
    Conserved Domains (2) summary
    PHA03307
    Location:261 → 557
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:261 → 379
    PRK07003; DNA polymerase III subunit gamma/tau

  9. NM_001375215.2 → NP_001362141.1  Fibronectin type-III domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5E4LWN1
    Conserved Domains (2) summary
    PHA03247
    Location:211 → 409
    PHA03247; large tegument protein UL36; Provisional
    PRK14950
    Location:259 → 345
    PRK14950; DNA polymerase III subunits gamma and tau; Provisional

  10. NM_001375216.2 → NP_001362142.1  Rab-GAP TBC domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5E4M3L3
    Conserved Domains (3) summary
    PHA03247
    Location:91 → 344
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:211 → 507
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:211 → 329
    PRK07003; DNA polymerase III subunit gamma/tau

  11. NM_001375217.2 → NP_001362143.1  Rab-GAP TBC domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5E4LZT0
    Conserved Domains (3) summary
    PHA03247
    Location:91 → 344
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:211 → 507
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:211 → 329
    PRK07003; DNA polymerase III subunit gamma/tau

  12. NM_078452.5 → NP_510853.2  Glycosyltransferase [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZS4
Nucleotide Protein
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