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idpp-2 Intrinsically Disordered Protein, expressed in Pharynx [ Caenorhabditis elegans ]

Gene ID: 181937, updated on 18-Sep-2024

Summary

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Official Symbol
idpp-2
Official Full Name
Intrinsically Disordered Protein, expressed in Pharynx
Primary source
WormBase:WBGene00015153
Locus tag
CELE_B0348.5
See related
AllianceGenome:WB:WBGene00015153
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See idpp-2 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (1635..6634)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Eukaryotic translation initiation factor 4E-3 Neighboring gene Secreted protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A spatiotemporal reconstruction of the C. elegans pharyngeal cuticle reveals a structure rich in phase-separating proteins. Kamal M, et al. Elife, 2022 Oct 19. PMID 36259463, Free PMC Article
  2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Intrinsically Disordered Protein, expressed in Pharynx
NP_001300036.1
  • Confirmed by transcript evidence;
    Product from WormBase gene class idpp
NP_001368549.1
  • Confirmed by transcript evidence;
    Product from WormBase gene class idpp

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    1635..6634
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001380574.2 → NP_001368549.1  Intrinsically Disordered Protein, expressed in Pharynx [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AV61

  2. NM_001313107.4 → NP_001300036.1  Intrinsically Disordered Protein, expressed in Pharynx [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AUN6
Nucleotide Protein
Heading Accession and Version

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